{"uniprot":"O43506","gene":"ADAM20","name":"Disintegrin and metalloproteinase domain-containing protein 20","organism":"Homo sapiens (Human)","status":"dark","length":726,"sequence":"MAVGEPLVHIRVTLLLLWFGMFLSISGHSQARPSQYFTSPEVVIPLKVISRGRGAKAPGWLSYSLRFGGQRYIVHMRVNKLLFAAHLPVFTYTEQHALLQDQPFIQDDCYYHGYVEGVPESLVALSTCSGGFLGMLQINDLVYEIKPISVSATFEHLVYKIDSDDTQFPPMRCGLTEEKIAHQMELQLSYNFTLKQSSFVGWWTHQRFVELVVVVDNIRYLFSQSNATTVQHEVFNVVNIVDSFYHPLEVDVILTGIDIWTASNPLPTSGDLDNVLEDFSIWKNYNLNNRLQHDVAHLFIKDTQGMKLGVAYVKGICQNPFNTGVDVFEDNRLVVFAITLGHELGHNLGMQHDTQWCVCELQWCIMHAYRKVTTKFSNCSYAQYWDSTISSGLCIQPPPYPGNIFRLKYCGNLVVEEGEECDCGTIRQCAKDPCCLLNCTLHPGAACAFGICCKDCKFLPSGTLCRQQVGECDLPEWCNGTSHQCPDDVYVQDGISCNVNAFCYEKTCNNHDIQCKEIFGQDARSASQSCYQEINTQGNRFGHCGIVGTTYVKCWTPDIMCGRVQCENVGVIPNLIEHSTVQQFHLNDTTCWGTDYHLGMAIPDIGEVKDGTVCGPEKICIRKKCASMVHLSQACQPKTCNMRGICNNKQHCHCNHEWAPPYCKDKGYGGSADSGPPPKNNMEGLNVMGKLRYLSLLCLLPLVAFLLFCLHVLFKKRTKSKEDEEG","function_summary":"A membrane-associated zinc-dependent protease that is displayed as a type I single-pass protein at the cell surface. Its extracellular region combines a latent catalytic module with adhesion modules that position the enzyme at pericellular sites. After prodomain removal, the catalytic site mediates pericellular proteolysis while disintegrin and cysteine-rich segments anchor the ectodomain to adhesion complexes. This coordinated proteolysis and adhesion at the plasma membrane likely remodels and organizes the extracellular environment that supports gamete interaction and fertilization.","plain_language":"ADAM20 has barely been studied. The model's best guess: A membrane-associated zinc-dependent protease that is displayed as a type I single-pass protein at the cell surface. Its extracellular region combines a latent catalytic module with adhesion modules that position the enzyme at pericellular sites.","uniprot_summary":"May be involved in tissue remodeling and repair.","go_terms":{"molecular_function":[{"id":"GO:0008237","label":"metallopeptidase activity"}],"biological_process":[{"id":"GO:0009566","label":"fertilization"}],"cellular_component":[{"id":"GO:0005886","label":"plasma membrane"}]},"interpro":[{"id":"IPR024079","name":"Metallopeptidase, catalytic domain superfamily","type":"homologous_superfamily","start":202,"end":399},{"id":"IPR036436","name":"Disintegrin domain superfamily","type":"homologous_superfamily","start":407,"end":491},{"id":"IPR002870","name":"Peptidase M12B, propeptide","type":"domain","start":42,"end":116},{"id":"IPR001590","name":"Peptidase M12B, ADAM/reprolysin","type":"domain","start":207,"end":395},{"id":"IPR034027","name":"Reprolysin domain, adamalysin-type","type":"domain","start":207,"end":396},{"id":"IPR001762","name":"Disintegrin domain","type":"domain","start":407,"end":493},{"id":"IPR006586","name":"ADAM, cysteine-rich domain","type":"domain","start":492,"end":628},{"id":"IPR018358","name":"Disintegrin, conserved site","type":"conserved_site","start":447,"end":466}],"reasoning":"I begin with the InterPro architecture and its order along the polypeptide. An N-terminal zymogen segment is defined by IPR002870 (Peptidase M12B, propeptide, residues 42–116), which typically maintains latency in ADAM/reprolysin enzymes until activation. Immediately downstream lies the catalytic core: IPR024079 (Metallopeptidase, catalytic domain superfamily, residues 202–399) encompasses IPR001590 (Peptidase M12B, ADAM/reprolysin, residues 207–395) and IPR034027 (Reprolysin domain, adamalysin-type, residues 207–396). This triad establishes a zinc-dependent metalloprotease fold that cleaves extracellular substrates. Following the catalytic module, the extracellular adhesion region appears: IPR036436 (Disintegrin domain superfamily, residues 407–491) and IPR001762 (Disintegrin domain, residues 407–493) are followed by IPR006586 (ADAM, cysteine-rich domain, residues 492–628). The disintegrin module is reinforced by IPR018358 (Disintegrin, conserved site, residues 447–466), indicating a conserved adhesive surface that often binds integrins or other matrix components. Together, this linear arrangement—propeptide → metallopeptidase core → disintegrin → cysteine-rich—defines a type I membrane ADAM architecture that projects a catalytic and adhesive ectodomain.\n\nThis architecture causes metallopeptidase chemistry as the primary molecular function. The reprolysin catalytic core (IPR001590/IPR034027 within IPR024079) supplies the zinc-binding active site and general acid/base residues that hydrolyze peptide bonds in extracellular or pericellular substrates, matching GO:0008237 metallopeptidase activity. The propeptide (IPR002870) enforces zymogen control; removal of this segment activates the enzyme, which in turn modulates signaling and adhesion at the cell surface.\n\nFrom function to process, the juxtaposition of a metallopeptidase with a disintegrin/cysteine-rich adhesive platform is a hallmark of pericellular remodeling that governs cell–cell and cell–matrix interactions. In reproductive tissues, such remodeling and adhesion are pivotal for gamete interactions and membrane fusion events. Thus, the enzyme’s pericellular proteolysis and adhesive binding logically feed into GO:0009566 fertilization by shaping the extracellular milieu and receptor landscapes that enable sperm–egg encounter and subsequent steps of gamete union.\n\nThe cellular context follows directly from the domain layout and membrane topology. ADAM ectodomains are displayed on the cell exterior by a single-pass type I membrane anchor, situating the catalytic and adhesive modules at the plasma membrane. This supports GO:0005886 plasma membrane and aligns with a membrane-associated, single-pass type I topology. The extracellular ectodomain executes proteolysis and adhesion outside the cell, while a short cytosolic tail likely coordinates trafficking and localization.\n\nMechanistically, I hypothesize that activation of the zymogen state exposes a zinc-dependent catalytic cleft that trims or activates surface/extracellular substrates, while the disintegrin and cysteine-rich modules dock onto integrins or matrix proteins to position the enzyme at adhesion hotspots. In reproductive contexts, this arrangement would fine-tune receptor availability and matrix composition to promote fertilization. Likely interaction partners include integrins (recognized by disintegrin surfaces), tetraspanins that scaffold membrane microdomains, and extracellular matrix components that guide substrate presentation and spatial control of proteolysis.","category":"dark","control_evaluation":null,"validation_plan":null,"structure":{"source":"AlphaFold DB","pdb":"/structures/AF-O43506.pdb","alphafold":"https://alphafold.ebi.ac.uk/entry/O43506"},"links":{"uniprot":"https://www.uniprot.org/uniprotkb/O43506/entry","atlas":"/p/O43506"},"provenance":{"model":"BioReason-Pro (ESM3 esm3-sm-open-v1)","source_list":"Pharos Tdark","note":"AI prediction, not experimentally verified"}}