{"uniprot":"O76002","gene":"OR2J2","name":"Olfactory receptor 2J2","organism":"Homo sapiens (Human)","status":"dark","length":312,"sequence":"MMIKKNASSEDFFILLGFSNWPQLEVVLFVVILIFYLMTLTGNLFIIILSYVDSHLHTPMYFFLSNLSFLDLCHTTSSIPQLLVNLRGPEKTISYAGCMVQLYFVLALGIAECVLLVVMSYDRYVAVCRPLHYTVLMHPRFCHLLAAASWVIGFTISALHSSFTFWVPLCGHRLVDHFFCEVPALLRLSCVDTHANELTLMVMSSIFVLIPLILILTAYGAIARAVLSMQSTTGLQKVFRTCGAHLMVVSLFFIPVMCMYLQPPSENSPDQGKFIALFYTVVTPSLNPLIYTLRNKHVKGAAKRLLGWEWGK","function_summary":"A seven-helix chemosensory receptor at the cell surface that binds volatile odorants and activates heterotrimeric G protein signaling to initiate neuronal responses. By elevating second messengers and engaging downstream ion channels, it drives sensory transduction that influences stress-responsive pathways and epithelial defense programs, and it can modulate behaviors that intersect with reproductive biology. Its multi-pass membrane architecture positions it at the plasma membrane, where ligand binding in an extracellular pocket triggers intracellular signaling through canonical GPCR mechanisms.","plain_language":"OR2J2 has barely been studied. The model's best guess: A seven-helix chemosensory receptor at the cell surface that binds volatile odorants and activates heterotrimeric G protein signaling to initiate neuronal responses. By elevating second messengers and engaging downstream ion channels, it drives sensory transduction that influences stress-responsive pathways and epithelial defense programs, and it can modulate behaviors that intersect with reproductive biology.","uniprot_summary":"Odorant receptor.","go_terms":{"molecular_function":[{"id":"GO:0004984","label":"olfactory receptor activity"}],"biological_process":[{"id":"GO:0019953","label":"sexual reproduction"},{"id":"GO:0006950","label":"response to stress"},{"id":"GO:0006952","label":"defense response"}],"cellular_component":[{"id":"GO:0005886","label":"plasma membrane"}]},"interpro":[{"id":"IPR017452","name":"GPCR, rhodopsin-like, 7TM","type":"domain","start":42,"end":291},{"id":"IPR000276","name":"G protein-coupled receptor, rhodopsin-like","type":"family","start":27,"end":51},{"id":"IPR000725","name":"Olfactory receptor","type":"family","start":34,"end":306},{"id":"IPR000276","name":"G protein-coupled receptor, rhodopsin-like","type":"family","start":60,"end":81},{"id":"IPR000276","name":"G protein-coupled receptor, rhodopsin-like","type":"family","start":105,"end":127},{"id":"IPR000276","name":"G protein-coupled receptor, rhodopsin-like","type":"family","start":200,"end":223},{"id":"IPR000276","name":"G protein-coupled receptor, rhodopsin-like","type":"family","start":273,"end":299}],"reasoning":"I begin with the InterPro architecture. The core transmembrane engine is IPR017452 (GPCR, rhodopsin-like, 7TM domain, residues 42–291), which encodes the canonical seven-helix bundle that transduces extracellular ligand binding into intracellular G protein activation. This structural core is bracketed and reinforced by multiple olfactory/rhodopsin-like GPCR family signatures: IPR000276 (G protein-coupled receptor, rhodopsin-like family) appears in several internal windows—[27–51], [60–81], [105–127], [200–223], and [273–299]—marking hallmark motifs across the N-terminus and within the transmembrane region that stabilize the active and inactive states of the receptor. The presence of IPR000725 (Olfactory receptor family, residues 34–306) specifies the sensory subclass that binds volatile odorants and couples to heterotrimeric G proteins to initiate neuronal signaling. The ordered layout—an N-terminal extracellular segment feeding into a tightly packed 7TM bundle and intracellular loops—causes classical GPCR signal transduction, with ligand binding in the extracellular cavity triggering conformational changes that recruit and activate G proteins.\n\nThis architecture dictates the molecular function formalized as GO:0004984 olfactory receptor activity. The seven-helix bundle and conserved rhodopsin-like motifs enable odorant recognition and G protein coupling, producing second-messenger cascades. Such signaling drives downstream cellular programs that align with organismal responses. In sensory epithelia, odor-evoked pathways modulate cellular stress pathways and survival decisions; thus the receptor’s activity contributes to GO:0006950 response to stress by tuning neuronal excitability and protective signaling. In parallel, chemosensory GPCR pathways in oral and nasal epithelia feed into broader organismal defense circuits—odorant detection can cue pathogen- or danger-associated cues—supporting GO:0006952 defense response. Chemosensory contributions to mating-related behaviors and pheromone/odorant detection can influence reproductive circuitry, providing a mechanistic route to GO:0019953 sexual reproduction through modulation of social and feeding behaviors that impact fertility and mating.\n\nThe seven-pass topology and absence of soluble domains anchor the protein at the cell surface. The rhodopsin-like GPCR fold and the olfactory receptor family identity together place the receptor in the plasma membrane, consistent with GO:0005886 plasma membrane and the experimentally typical multi-pass membrane localization. The extracellular N-terminus and lumenal loops form the odorant-binding pocket, while intracellular loops and the C-terminal tail couple to G proteins and regulatory factors.\n\nMechanistically, odorant binding in the extracellular vestibule stabilizes an active 7TM conformation that engages an olfactory-type G protein (e.g., Golf), elevating cAMP via adenylyl cyclase and propagating calcium signals through downstream channels. I therefore hypothesize interactions with the olfactory G protein alpha subunit (GNAL), Gβγ subunits, adenylyl cyclase 3, and regulatory proteins such as GRKs and arrestins that tune desensitization and trafficking. Accessory factors that promote membrane delivery and stability in olfactory neurons are also likely partners, forming a transient signaling hub that links odor detection to stress-responsive and defense-associated pathways and to reproductive behavior circuits.","category":"dark","control_evaluation":null,"validation_plan":null,"structure":{"source":"AlphaFold DB","pdb":"/structures/AF-O76002.pdb","alphafold":"https://alphafold.ebi.ac.uk/entry/O76002"},"links":{"uniprot":"https://www.uniprot.org/uniprotkb/O76002/entry","atlas":"/p/O76002"},"provenance":{"model":"BioReason-Pro (ESM3 esm3-sm-open-v1)","source_list":"Pharos Tdark","note":"AI prediction, not experimentally verified"}}