Proteins / IGLJ1
IGLJ1
Immunoglobulin lambda joining 1
Predicted 3D structure
AlphaFold model.
In plain language
IGLJ1 has barely been studied. The model's best guess: A single-pass membrane adaptor that resides predominantly at mitochondria and also associates with the endoplasmic reticulum, where it uses multivalent protein binding to organize assemblies that coordinate organelle communication and mitochondrial remodeling during germ cell development. By anchoring and scaffolding outer-membrane and contact-site complexes, it helps tune pathways essential for spermatogenesis.
A single-pass membrane adaptor that resides predominantly at mitochondria and also associates with the endoplasmic reticulum, where it uses multivalent protein binding to organize assemblies that coordinate organelle communication and mitochondrial remodeling during germ cell development.
Confidence: the model gives no confidence score, and this protein has no known function to compare with. Treat it as a hypothesis.
Protein domains
Known building blocks found by InterPro, placed along the 42 amino acids of the chain. Hover or tap a block for details.
Predicted function
Model summary
A single-pass membrane adaptor that resides predominantly at mitochondria and also associates with the endoplasmic reticulum, where it uses multivalent protein binding to organize assemblies that coordinate organelle communication and mitochondrial remodeling during germ cell development. By anchoring and scaffolding outer-membrane and contact-site complexes, it helps tune pathways essential for spermatogenesis.
Predicted Gene Ontology terms
Model reasoning
How the model got to its answer
- 01
I begin with the InterPro architecture.
Although no specific domains are annotated here, the sequence-level description indicates a single-pass membrane protein that localizes to mitochondria and associates with both the mitochondrial outer membrane and endoplasmic reticulum. A solitary transmembrane segment coupled with broad protein-binding behavior is a hallmark of membrane-anchored adaptors that scaffold or regulate larger assemblies rather than catalyze reactions. This architecture causally supports a molecular role centered on multivalent protein binding (GO:0005515), rather than enzymatic chemistry.
- 02
From this binding-centric foundation, I infer function by considering cellular context.
The explicit mitochondrial targeting and single-pass topology position the protein as a membrane-tethered organizer at the organelle surface. Such outer-membrane adaptors frequently coordinate ER–mitochondria contact sites and import/export pathways that tune mitochondrial biogenesis and dynamics. This causal chain—membrane anchoring, protein-binding scaffold activity, and mitochondrial residence—aligns with a role in germ cell development where mitochondrial remodeling is pronounced.
- 03
The biological process follows directly.
Spermatogenesis (GO:0007283) imposes extreme mitochondrial demands: midpiece assembly, energy production, and regulated apoptosis. A mitochondrion-anchored binding hub at the outer membrane can modulate protein flux and signaling that specify germ cell maturation. Therefore, the architecture and localization together drive a function that supports spermatogenic progression.
- 04
Cellular location is resolved by convergent evidence.
The presence at mitochondria (GO:0005739) is reinforced by the single-pass membrane nature and the experimentally observed distribution between the mitochondrial outer membrane and the endoplasmic reticulum. This dual residency implies a role at inter-organelle junctions, where outer-membrane tethers and ER partners coordinate lipid exchange, calcium signaling, and import pathways that collectively shape mitochondrial function during germ cell differentiation.
- 05
Mechanistically, I hypothesize that the protein acts as a membrane-embedded adaptor that binds partners to regulate ER–mitochondria contact and outer-membrane signaling.
Likely interaction cohorts include TOM complex components (e.g., TOMM20/TOMM22) that govern mitochondrial protein import, outer-membrane porins (VDACs) that tune metabolite flux, and ER–mitochondria tethers such as MFN2 and mitofusin-associated networks. In germ cells, transient assemblies with import machinery and contact-site proteins would channel mitochondrial biogenesis and apoptosis cues to ensure orderly spermatogenic maturation.
Technical details
InterPro entries
Sources
- Sequence: UniProt A0A0A0MT76
- Structure: AlphaFold DB (PDB file)
- Domains: InterPro
- Dark protein list: Pharos (Tdark)
Method
BioReason-Pro with the ESM3 protein language model (esm3-sm-open-v1). How the atlas is made →