Proteins / FHAD1
FHAD1
Forkhead-associated domain-containing protein 1
Predicted 3D structure
AlphaFold model.
In plain language
FHAD1 has barely been studied. The model's best guess: A human centrosome-associated scaffold that combines an N-terminal phospho-recognition module with a large coiled-coil body to assemble signaling and structural complexes. By binding phosphorylated partners and oligomerizing into higher-order assemblies, it coordinates centrosomal architecture with transcriptional programs that drive the G1/S transition.
A human centrosome-associated scaffold that combines an N-terminal phospho-recognition module with a large coiled-coil body to assemble signaling and structural complexes.
Confidence: the model gives no confidence score, and this protein has no known function to compare with. Treat it as a hypothesis.
Protein domains
Known building blocks found by InterPro, placed along the 1412 amino acids of the chain. Hover or tap a block for details.
- SMAD/FHA domain superfamily · 11–95
- Forkhead-associated (FHA) domain · 17–85
- CCDC27/FHAD1, coiled-coil · 278–537
- Coiled-coil and Forkhead-associated domain-containing protein · 1–563
Predicted function
Model summary
A human centrosome-associated scaffold that combines an N-terminal phospho-recognition module with a large coiled-coil body to assemble signaling and structural complexes. By binding phosphorylated partners and oligomerizing into higher-order assemblies, it coordinates centrosomal architecture with transcriptional programs that drive the G1/S transition. This coupling of a phospho-sensing head and a coiled-coil tail enables regulated protein interactions that promote RNA polymerase II–dependent transcription while positioning the complex at the centrosome.
Predicted Gene Ontology terms
Biological process
Which larger process it takes part in
- GO:0000083 regulation of transcription involved in G1/S transition of mitotic cell cycle
- GO:0045944 positive regulation of transcription by RNA polymerase II
Model reasoning
How the model got to its answer
- 01
I begin with the domain architecture.
The N-terminus carries IPR008984 (SMAD/FHA domain superfamily, residues 11–95), within which sits a well-defined IPR000253 FHA domain (residues 17–85). FHA modules are phosphothreonine-recognition folds that create regulated protein–protein interfaces, typically wiring checkpoint and cell-cycle signaling. The C-terminal half is dominated by IPR060375 (CCDC27/FHAD1, coiled-coil, residues 278–537), a predicted oligomerization scaffold that stabilizes higher-order assemblies. The entire polypeptide is encompassed by IPR052642 (Coiled-coil and Forkhead-associated domain-containing protein family, residues 1–563), indicating a conserved bipartite design: an N-terminal phospho-sensor FHA domain followed by an extended coiled-coil tail that mediates multivalent assembly. This architecture causally enforces protein-binding capacity through two complementary surfaces—an FHA phospho-reader and a coiled-coil oligomerization platform—supporting GO:0005515 protein binding as the molecular function.
- 02
From this molecular scaffold, I infer process-level roles.
FHA domains frequently gate cell-cycle transitions by decoding phosphorylation at centrosomes and kinetochores. The presence of a long coiled-coil region suggests a structural hub that recruits and stabilizes pericentriolar complexes. Such assemblies are well-suited to coordinate transcriptional regulators that drive entry into S phase. This mechanistic coupling explains participation in GO:0000083 regulation of transcription involved in G1/S transition of the mitotic cell cycle and GO:0045944 positive regulation of transcription by RNA polymerase II: the FHA domain senses phosphorylation cues, while the coiled-coil tail nucleates assemblies that potentiate transcriptional programs necessary for G1/S.
- 03
Cellular localization follows directly from the assembly logic.
A phospho-sensing FHA head tethered to a large coiled-coil body is optimized for pericentriolar matrix scaffolding and cell-cycle signaling nodes. This predicts residence at the GO:0005813 centrosome, consistent with a role in organizing microtubule-organizing centers and coordinating mitotic entry.
- 04
Mechanistically, I hypothesize that the FHA domain captures phosphorylated partners during cell-cycle transitions, while the coiled-coil region oligomerizes to build a centrosomal scaffold that both senses and transmits checkpoint signals.
This scaffold likely recruits centrosomal organizers and transcriptional regulators to synchronize structural cell-cycle events with gene expression. Likely partners include centrosomal matrix proteins and checkpoint kinases that provide phospho-motifs for FHA engagement, as well as transcriptional coactivators that amplify RNA polymerase II–driven programs at the G1/S boundary.
Technical details
InterPro entries
Sources
- Sequence: UniProt B1AJZ9
- Structure: AlphaFold DB (PDB file)
- Domains: InterPro
- Dark protein list: Pharos (Tdark)
Method
BioReason-Pro with the ESM3 protein language model (esm3-sm-open-v1). How the atlas is made →