Proteins / ADRB2
ADRB2
Beta-2 adrenergic receptor
Predicted 3D structure
AlphaFold model.
In plain language
ADRB2 is a well-known protein (GPCR). What biology already knows: G protein-coupled receptor for catecholamines that couples to both G(s) and G(i) proteins, activating bifurcated signaling pathways. We use it to check whether the model gets it right.
Protein domains
Known building blocks found by InterPro, placed along the 413 amino acids of the chain. Hover or tap a block for details.
- GPCR, rhodopsin-like, 7TM · 50–326
- Beta 2 adrenoceptor · 10–30
- Beta 2 adrenoceptor · 34–336
- G protein-coupled receptor, rhodopsin-like · 35–340
- Adrenoceptor family · 88–99
- Adrenoceptor family · 141–149
- Adrenoceptor family · 219–226
- Adrenoceptor family · 331–340
- Beta 2 adrenoceptor · 342–360
- Beta 2 adrenoceptor · 361–380
- Beta 2 adrenoceptor · 387–406
Compared with known biology
ADRB2 is well studied, so we use it to check the model. See the full control set →
Known biology
- protein-containing complex binding · GO:0044877Correct
- amyloid-beta binding · GO:0001540Correct
- potassium channel regulator activity · GO:0015459Correct
- protein homodimerization activity · GO:0042803Correct
- amyloid-beta binding · GO:0001540Correct
- beta2-adrenergic receptor activity · GO:0004941Correct
- response to psychosocial stress · GO:1990911Correct
- cell surface receptor signaling pathway · GO:0007166Correct
- adrenergic receptor signaling pathway · GO:0071875Correct
- negative regulation of G protein-coupled receptor signaling pathway · GO:0045744Correct
- positive regulation of autophagosome maturation · GO:1901098Correct
- adenylate cyclase-modulating G protein-coupled receptor signaling pathway · GO:0007188Correct
- positive regulation of autophagosome maturation · GO:1901098Correct
- endosome to lysosome transport · GO:0008333Correct
- cell surface receptor signaling pathway · GO:0007166Correct
- positive regulation of MAPK cascade · GO:0043410Correct
- positive regulation of autophagosome maturation · GO:1901098Correct
- negative regulation of G protein-coupled receptor signaling pathway · GO:0045744Correct
- cellular response to amyloid-beta · GO:1904646Correct
- receptor-mediated endocytosis · GO:0006898Correct
- signaling receptor complex · GO:0043235Correct
- Golgi apparatus · GO:0005794Correct
- plasma membrane · GO:0005886Correct
- endosome membrane · GO:0010008Correct
- lysosome · GO:0005764Correct
- clathrin-coated endocytic vesicle membrane · GO:0030669Correct
- norepinephrine binding · GO:0051380Missed
- positive regulation of glutamate receptor signaling pathway · GO:1900451Missed
Source: UniProt P07550, GO annotations (all evidence for "correct"; experimental evidence for "missed", max 2 per aspect shown)
AI prediction
- GO:0044877 protein-containing complex bindingCorrect
- GO:0042277 peptide bindingCorrect
- GO:0015459 potassium channel regulator activityCorrect
- GO:0042803 protein homodimerization activityCorrect
- GO:0001540 amyloid-beta bindingCorrect
- GO:0004935 adrenergic receptor activityCorrect
- GO:0006950 response to stressCorrect
- GO:0007166 cell surface receptor signaling pathwayCorrect
- GO:0071875 adrenergic receptor signaling pathwayCorrect
- GO:0045744 negative regulation of G protein-coupled receptor signaling pathwayCorrect
- GO:0010508 positive regulation of autophagyCorrect
- GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathwayCorrect
- GO:2000273 positive regulation of signaling receptor activitySpeculative
- GO:0043243 positive regulation of protein-containing complex disassemblyCorrect
- GO:0065003 protein-containing complex assemblySpeculative
- GO:0010738 regulation of protein kinase A signalingSpeculative
- GO:0008333 endosome to lysosome transportCorrect
- GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathwayCorrect
- GO:0043410 positive regulation of MAPK cascadeCorrect
- GO:2000311 regulation of AMPA receptor activitySpeculative
- GO:1901098 positive regulation of autophagosome maturationCorrect
- GO:0002029 desensitization of G protein-coupled receptor signaling pathwayCorrect
- GO:0032091 negative regulation of protein bindingSpeculative
- GO:1904646 cellular response to amyloid-betaCorrect
- GO:0006898 receptor-mediated endocytosisCorrect
- GO:0007190 activation of adenylate cyclase activitySpeculative
- GO:1901653 cellular response to peptideSpeculative
- GO:2000479 regulation of cAMP-dependent protein kinase activitySpeculative
- GO:0043235 receptor complexCorrect
- GO:0005794 Golgi apparatusCorrect
- GO:0005886 plasma membraneCorrect
- GO:0010008 endosome membraneCorrect
- GO:0005764 lysosomeCorrect
- GO:0030669 clathrin-coated endocytic vesicle membraneCorrect
BioReason-Pro
Predicted function
Model summary
A seven-transmembrane adrenergic receptor that senses catecholamines at the cell surface and activates G protein signaling to elevate cAMP, stimulate PKA and MAPK pathways, and modulate downstream targets including potassium channels and synaptic receptor systems. It assembles into higher-order complexes and homodimers, undergoes regulated endocytosis, and traffics through endosomes to lysosomes after internalization. The receptor’s architecture and trafficking motifs coordinate robust signaling at the plasma membrane and through the Golgi–endosome–lysosome route, integrating stress responses and amyloid-beta engagement with canonical adrenergic signaling.
Predicted Gene Ontology terms
Molecular function
What it does chemically
- GO:0044877 protein-containing complex binding
- GO:0042277 peptide binding
- GO:0015459 potassium channel regulator activity
- GO:0042803 protein homodimerization activity
- GO:0001540 amyloid-beta binding
- GO:0004935 adrenergic receptor activity
Biological process
Which larger process it takes part in
- GO:0006950 response to stress
- GO:0007166 cell surface receptor signaling pathway
- GO:0071875 adrenergic receptor signaling pathway
- GO:0045744 negative regulation of G protein-coupled receptor signaling pathway
- GO:0010508 positive regulation of autophagy
- GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway
- GO:2000273 positive regulation of signaling receptor activity
- GO:0043243 positive regulation of protein-containing complex disassembly
- GO:0065003 protein-containing complex assembly
- GO:0010738 regulation of protein kinase A signaling
- GO:0008333 endosome to lysosome transport
- GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway
- GO:0043410 positive regulation of MAPK cascade
- GO:2000311 regulation of AMPA receptor activity
- GO:1901098 positive regulation of autophagosome maturation
- GO:0002029 desensitization of G protein-coupled receptor signaling pathway
- GO:0032091 negative regulation of protein binding
- GO:1904646 cellular response to amyloid-beta
- GO:0006898 receptor-mediated endocytosis
- GO:0007190 activation of adenylate cyclase activity
- GO:1901653 cellular response to peptide
- GO:2000479 regulation of cAMP-dependent protein kinase activity
Cellular component
Where in the cell it sits
- GO:0043235 receptor complex
- GO:0005794 Golgi apparatus
- GO:0005886 plasma membrane
- GO:0010008 endosome membrane
- GO:0005764 lysosome
- GO:0030669 clathrin-coated endocytic vesicle membrane
Model reasoning
How the model got to its answer
- 01
I begin with the InterPro architecture.
The core transmembrane engine is IPR017452 (GPCR, rhodopsin-like, 7TM domain, residues 50–326), which establishes a seven-helix bundle that transduces extracellular ligand binding into intracellular G protein coupling. This rhodopsin-like scaffold is reinforced by multiple family-level signatures that specify adrenergic identity and subtype: IPR000332 (Beta 2 adrenoceptor family, residues 10–30; 34–336) and IPR000276 (G protein-coupled receptor, rhodopsin-like family, residues 35–340) together define a class A GPCR tuned for catecholamine sensing. Three adrenoceptor-family marks (IPR002233, residues 88–99; 141–149; 219–226; and a C-terminal adrenoceptor family mark at residues 331–340) map to conserved extracellular and intracellular loops that stabilize agonist binding and G protein engagement. The N- and C-terminal adrenoceptor family signatures (IPR000332 beta-2 adrenoceptor family, residues 342–360, 361–380, 387–406) bracket the cytoplasmic tail that recruits arrestins and endocytic machinery. This ordered layout—extracellular adrenoceptor determinants feeding a rhodopsin-like 7TM core and terminating in a regulatory cytoplasmic tail—causes catecholamine-triggered G protein signaling and receptor trafficking.
- 02
From this architecture, the molecular function resolves as follows.
The rhodopsin-like 7TM core and adrenoceptor determinants specify GO:0004935 adrenergic receptor activity and GO:0042277 peptide binding in the sense of catecholamine/peptidergic ligand recognition. The obligate coupling to heterotrimeric G proteins and assembly into higher-order receptor assemblies supports GO:0044877 protein-containing complex binding and GO:0042803 protein homodimerization activity; class A GPCRs often homodimerize and scaffold with cytosolic partners. The cytoplasmic tail and downstream cAMP/PKA signaling provide a mechanistic basis for GO:0015459 potassium channel regulator activity, as cAMP/PKA pathways modulate K+ channels via direct channel or adaptor interactions. The extracellular and luminal surfaces of this receptor can also capture amyloidogenic peptides, consistent with GO:0001540 amyloid-beta binding.
- 03
The biological process landscape follows directly from Gs-coupled cAMP signaling and regulated trafficking.
The primary pathway is GO:0071875 adrenergic receptor signaling pathway and GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway, with GO:0007190 activation of adenylate cyclase activity and GO:2000479 regulation of cAMP-dependent protein kinase activity driving GO:0010738 regulation of protein kinase A signaling. These cascades propagate to GO:0043410 positive regulation of MAPK cascade and GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway via cAMP-sensitive nodes. The receptor’s endocytic itinerary—GO:0006898 receptor-mediated endocytosis, GO:0008333 endosome to lysosome transport, and GO:1901098 positive regulation of autophagosome maturation—arises from arrestin-mediated sorting and lysosomal delivery. Its influence on synaptic receptor systems is captured by GO:2000273 positive regulation of signaling receptor activity and GO:2000311 regulation of AMPA receptor activity, while stress and stress-hormone responses are reflected in GO:0006950 response to stress and GO:1904646 cellular response to amyloid-beta. The pathway can attenuate via GO:0002029 desensitization of G protein-coupled receptor signaling pathway and GO:0032091 negative regulation of protein binding through arrestin and coreceptor assemblies.
- 04
Cellular localization is dictated by the 7TM architecture and trafficking motifs.
The receptor resides at the GO:0005886 plasma membrane and assembles into a GO:0043235 receptor complex. Biosynthetic and post-Golgi routing place it through the GO:0005794 Golgi apparatus. Agonist-induced internalization and sorting place it on the GO:0010008 endosome membrane and within GO:0030669 clathrin-coated endocytic vesicle membrane, with terminal delivery to the GO:0005764 lysosome.
- 05
Mechanistically, agonist binding stabilizes an active 7TM conformation that couples to Gs to elevate cAMP and activate PKA and MAPK pathways, while homodimerization and complex binding tune signal amplitude and duration.
I hypothesize interactions with GNAS (Gs alpha), Gβγ subunits, adenylyl cyclases, GRKs, and beta-arrestins that drive endocytosis and lysosomal routing. Additional partners likely include amyloid-beta and amyloid-binding adaptors, K+ channel complexes regulated by cAMP/PKA, and synaptic receptor assemblies that coordinate AMPA receptor function. This ensemble explains catecholamine sensing, potassium channel regulation, amyloid-beta engagement, and the full spectrum of endocytic and signaling outcomes.
Technical details
InterPro entries
- IPR017452 GPCR, rhodopsin-like, 7TM domain · 50–326
- IPR000332 Beta 2 adrenoceptor family · 10–30
- IPR000332 Beta 2 adrenoceptor family · 34–336
- IPR000276 G protein-coupled receptor, rhodopsin-like family · 35–340
- IPR002233 Adrenoceptor family family · 88–99
- IPR002233 Adrenoceptor family family · 141–149
- IPR002233 Adrenoceptor family family · 219–226
- IPR002233 Adrenoceptor family family · 331–340
- IPR000332 Beta 2 adrenoceptor family · 342–360
- IPR000332 Beta 2 adrenoceptor family · 361–380
- IPR000332 Beta 2 adrenoceptor family · 387–406
Sources
- Sequence: UniProt P07550
- Structure: AlphaFold DB (PDB file)
- Domains: InterPro
- Dark protein list: Pharos (Tdark)
Method
BioReason-Pro with the ESM3 protein language model (esm3-sm-open-v1). How the atlas is made →