Proteins / ERVFC1-1

DarkP60608 · Homo sapiens (Human) · 527 aa

ERVFC1-1

Endogenous retrovirus group FC1 member 1 Env polyprotein

AI prediction, not experimentally verified. The function, GO terms and reasoning are generated by a model (BioReason-Pro). Treat them as a hypothesis to test, not as a fact.

Predicted 3D structure

AlphaFold model.

In plain language

ERVFC1-1 has barely been studied. The model's best guess: A cell-surface fusogenic glycoprotein that is essential for terminal stages of muscle formation. It is synthesized via the secretory pathway and displayed at the plasma membrane, where it binds partner proteins and undergoes conformational changes that promote membrane merger between adjacent myogenic cells.

Predicted function

A cell-surface fusogenic glycoprotein that is essential for terminal stages of muscle formation.

Confidence: the model gives no confidence score, and this protein has no known function to compare with. Treat it as a hypothesis.

Sequence · 527 aa · coloured by model confidence
1MNSPCDRLQQ11FIQVLLEESW21SFPSFANTLH31WPENLLSYID41ELVWQGSLQN51FHQHEVRFDK61PPLRLPLTGF71SSLTENWSSR81QAVSSRLVAT91AASPPAGCQA101PIAFLGLKFS111SLGPARKNPA121LCFLYDQSNS131KCNTSWVKEN141VGCPWHWCNI151HEALIRTEKG161SDPMFYVNTS171TGGRDGFNGF181NLQISDPWDP191RWASGVDGGL201YEHKTFMYPV211AKIRIARTLK221TTVTGLSDLA231SSIQSAEKEL241TSQLQPAADQ251AKSSRFSWLT261LISEGAQLLQ271STGVQNLSHC281FLCAALRRPP291LVAVPLPTPF301NYTINSSTPI311PPVPKGQVPL321FSDPIRHKFP331FCYSTPNASW341CNQTRMLTST351PAPPRGYFWC361NSTLTKVLNS371TGNHTLCLPI381SLIPGLTLYS391QDELSHLLAW401TEPRPQNKSK411WAIFLPLVLG421ISLASSLVAS431GLGKGALTHS441IQTSQDLSTH451LQLAIEASAE461SLDSLQRQIT471TVAQVAAQNR481QALDLLMAEK491GRTCLFLQEE501CCYYLNESGV511VENSLQTLKK521KKSSKRS

Protein domains

Known building blocks found by InterPro, placed along the 527 amino acids of the chain. Hover or tap a block for details.

150100150200250300350400450500527

Predicted function

Model summary

A cell-surface fusogenic glycoprotein that is essential for terminal stages of muscle formation. It is synthesized via the secretory pathway and displayed at the plasma membrane, where it binds partner proteins and undergoes conformational changes that promote membrane merger between adjacent myogenic cells. By assembling at fusion-competent membrane microdomains and trafficking through vesicular/extracellular routes, it drives multinucleated myotube formation and coordinates with adhesion and vesicle machinery to complete myoblast fusion.

Predicted Gene Ontology terms

Molecular function

What it does chemically

Biological process

Which larger process it takes part in

Cellular component

Where in the cell it sits

Model reasoning

How the model got to its answer

  1. 01

    I begin with the InterPro architecture: a single annotated region, IPR018154 (TLV/ENV coat polyprotein family) spanning residues 232–525.

    This family signature marks retroviral envelope glycoproteins that are synthesized as a polyprotein and then proteolytically matured into an N-terminal receptor-binding ectodomain and a C-terminal transmembrane fusion module. The placement of this ENV-like module in the C-terminal half implies an upstream signal peptide and secretory pathway entry, followed by a luminal/extracellular ectodomain and a downstream single-pass transmembrane region that anchors the complex at the cell surface. This architecture causes avid protein–protein interactions through the ectodomain and intracellular/cytoplasmic tails, supporting GO:0005515 protein binding as the molecular function.

  2. 02

    ENV-like fusogens drive membrane merger by first binding a surface receptor and then undergoing large conformational transitions that force membrane apposition and fusion.

    In muscle lineage cells, such fusogenic activity directly enables syncytium formation. This causal chain—from a fusogenic ENV-like core to membrane merger—maps to the biological processes formalized as GO:0000768 syncytium formation by plasma membrane fusion and GO:0007520 myoblast fusion. The same fusogenic logic explains why this protein is essential for terminal myogenesis: coordinated membrane remodeling and cell–cell adhesion transitions culminate in multinucleated myotubes.

  3. 03

    The cellular geography follows from the secretory/fusogenic architecture and the provided localization.

    The ENV-like module dictates a primary residence at the plasma membrane and cell surface, aligning with GO:0005886 plasma membrane and GO:0009986 cell surface. Trafficking through endosomal/extracellular vesicle routes is typical for fusogens and explains detection in GO:0070062 extracellular exosome. Storage and mobilization via specialized secretory granules is consistent with GO:0070821 tertiary granule membrane and GO:0101003 ficolin-1-rich granule membrane, which together suggest regulated exocytosis and surface upregulation. Altogether, the membrane-anchored, secretory-pathway-derived architecture accounts for the observed compartmental distribution.

  4. 04

    Mechanistically, the ENV-like ectodomain likely binds a yet-unidentified cell-surface partner to trigger fusogenic activation, while the transmembrane/cytoplasmic tail organizes signaling and trafficking that concentrate the fusogen at fusion-competent membrane microdomains.

    I hypothesize that the protein forms transient complexes with fusogenic and adhesion machinery: tetraspanins (CD9/CD81) to scaffold membrane platforms; integrins to couple adhesion and fusion; and fusogens such as syncytin–MBL family or the endogenous fusogenic factor Myomaker (TMEM88B). These assemblies would localize and activate the fusogen at myoblast–myoblast interfaces, driving efficient membrane merger during terminal myogenesis.

Technical details

InterPro entries

  • IPR018154 TLV/ENV coat polyprotein family · 232–525

Sources

Method

BioReason-Pro with the ESM3 protein language model (esm3-sm-open-v1). How the atlas is made →

API

/api/v1/proteins/P60608 · API docs