Proteins / PIK3CD-AS1
PIK3CD-AS1
Putative uncharacterized protein PIK3CD-AS1
Predicted 3D structure
AlphaFold model.
In plain language
PIK3CD-AS1 has barely been studied. The model's best guess: A human nucleoplasmic scaffold that advances the mitotic cell cycle by organizing protein assemblies rather than catalyzing reactions. By concentrating and stabilizing mitotic regulators in the nucleus, it promotes cell division and supports neural progenitor proliferation and self-renewal that underpin neurogenesis.
A human nucleoplasmic scaffold that advances the mitotic cell cycle by organizing protein assemblies rather than catalyzing reactions.
Confidence: the model gives no confidence score, and this protein has no known function to compare with. Treat it as a hypothesis.
Protein domains
Known building blocks found by InterPro, placed along the 167 amino acids of the chain. Hover or tap a block for details.
Predicted function
Model summary
A human nucleoplasmic scaffold that advances the mitotic cell cycle by organizing protein assemblies rather than catalyzing reactions. By concentrating and stabilizing mitotic regulators in the nucleus, it promotes cell division and supports neural progenitor proliferation and self-renewal that underpin neurogenesis. Its binding-driven mechanism likely coordinates assembly of nuclear complexes that prime and execute mitosis, thereby coupling cell-cycle progression to developmental programs.
Predicted Gene Ontology terms
Biological process
Which larger process it takes part in
- GO:0045931 positive regulation of mitotic cell cycle
Model reasoning
How the model got to its answer
- 01
I begin with the InterPro architecture.
The sequence carries a single annotated module: GO:0005515 protein binding. The presence of only a generic protein-binding signature and the absence of catalytic or nucleic-acid–binding domains indicates a non-enzymatic adaptor or scaffold that organizes other proteins through multivalent interactions. Such architectures typically mediate assembly and timing of macromolecular complexes rather than performing chemistry directly.
- 02
From this binding-centric core, the most direct molecular function is protein binding (GO:0005515).
A binding scaffold in mitotic control can couple upstream signals to downstream effectors. The biological role inferred from this architecture aligns with positive regulation of the mitotic cell cycle (GO:0045931). A binding-driven mechanism can promote mitosis by stabilizing mitotic assemblies, concentrating kinases and substrates, and coordinating transitions through spindle formation and chromosome segregation.
- 03
Cellular localization follows from function and architecture.
A soluble adaptor that assembles mitotic machinery is expected to concentrate in the nucleoplasm (GO:0005654), where it can interface with chromatin-associated complexes and nuclear pools of cell-cycle regulators before and during mitotic entry. The nucleoplasmic residence also positions the protein to hand off factors to nuclear export pathways and to the spindle apparatus as cells prepare for and execute division.
- 04
These inferences converge on a mechanism: a nucleoplasmic scaffold that promotes mitotic progression by organizing protein complexes.
By stabilizing assemblies that drive mitosis, it can influence cell fate decisions. In neural progenitors, enhanced mitotic drive and faithful division support proliferation and self-renewal, thereby contributing to neurogenesis and the maintenance of progenitor pools. Thus, a binding-driven assembly factor in the nucleoplasm causally links to mitotic acceleration and to downstream developmental outcomes.
- 05
Given this role, likely interaction partners are core mitotic and neurogenic regulators.
The scaffold may transiently bind cyclin-dependent kinase complexes and their regulators to potentiate mitotic entry; microtubule-associated assemblies that form the spindle; and chromatin-remodeling or transcriptional regulators that govern progenitor self-renewal. In neural contexts, it may also associate with lineage-specifying transcription factors and RNA-binding assemblies that balance proliferation with differentiation. Together, these interactions provide a mechanistic route from a binding-centric domain architecture to nucleoplasmic assembly control that advances the mitotic cell cycle and supports neurogenic programs.
Technical details
InterPro entries
Sources
- Sequence: UniProt Q5SR53
- Structure: AlphaFold DB (PDB file)
- Domains: InterPro
- Dark protein list: Pharos (Tdark)
Method
BioReason-Pro with the ESM3 protein language model (esm3-sm-open-v1). How the atlas is made →