Proteins / KLHDC7A
KLHDC7A
Kelch domain-containing protein 7A
Predicted 3D structure
AlphaFold model.
In plain language
KLHDC7A has barely been studied. The model's best guess: A cytoplasmic scaffold that assembles a β-propeller–based binding platform to chaperone precursor proteins toward the mitochondrial surface and promote their insertion into the outer membrane during mitochondrial biogenesis. It operates as a soluble adaptor that captures substrates and assembly factors in the cytoplasm, then engages the mitochondrial interface to facilitate outer-membrane protein insertion and maturation.
A cytoplasmic scaffold that assembles a β-propeller–based binding platform to chaperone precursor proteins toward the mitochondrial surface and promote their insertion into the outer membrane during mitochondrial biogenesis.
Confidence: the model gives no confidence score, and this protein has no known function to compare with. Treat it as a hypothesis.
Protein domains
Known building blocks found by InterPro, placed along the 777 amino acids of the chain. Hover or tap a block for details.
- Kelch-type beta-propeller · 491–742
- Kelch/BTB domain-containing protein · 6–776
- Kelch repeat type 1 · 531–632
Predicted function
Model summary
A cytoplasmic scaffold that assembles a β-propeller–based binding platform to chaperone precursor proteins toward the mitochondrial surface and promote their insertion into the outer membrane during mitochondrial biogenesis. It operates as a soluble adaptor that captures substrates and assembly factors in the cytoplasm, then engages the mitochondrial interface to facilitate outer-membrane protein insertion and maturation.
Predicted Gene Ontology terms
Biological process
Which larger process it takes part in
- GO:0045040 protein insertion into mitochondrial outer membrane
Cellular component
Where in the cell it sits
- GO:0005737 cytoplasm
- GO:0005741 mitochondrial outer membrane
Model reasoning
How the model got to its answer
- 01
I begin with the InterPro architecture.
The polypeptide carries IPR052310 (Kelch/BTB domain-containing protein family) spanning residues 6–776, indicating a BTB–Kelch-type scaffold that typically mediates cytosolic protein–protein interactions and assembly of larger complexes. Within this framework, a discrete C-terminal β-propeller is evident: IPR015915 (Kelch-type beta-propeller homologous superfamily) from residues 491–742. Embedded in this propeller, IPR006652 (Kelch repeat type 1) from residues 531–632 specifies the canonical repeat units that fold into a six-bladed β-propeller. This ordered layout—an N-terminal BTB/Kelch-family scaffold followed by a C-terminal Kelch β-propeller—creates a high-avidity, multivalent binding platform. Such an architecture causes robust protein binding rather than catalysis, aligning with GO:0005515 protein binding as the molecular function.
- 02
A Kelch/BTB scaffold positioned near membranes often organizes assembly pathways.
Here, the β-propeller provides a rigid surface for selective substrate capture and adaptor recruitment. This binding capacity can be harnessed to chaperone precursor proteins toward mitochondrial import. The biological role crystallizes around mitochondrial biogenesis: the scaffold can stabilize and present precursor polypeptides and assembly factors that drive insertion of β-barrel and tail-anchored clients into the organelle’s outer membrane. This causal chain—high-specificity binding platform assembling import/assembly modules—maps directly to GO:0045040 protein insertion into mitochondrial outer membrane.
- 03
Cellular placement follows from function and architecture.
BTB–Kelch scaffolds are soluble and cytoplasmic by default, consistent with a cytoplasmic pool that captures and hands off substrates. As assembly proceeds, the complex engages the mitochondrial surface. The functional endpoint—facilitating insertion at the organelle—anchors the protein’s operational site to the mitochondrial outer membrane, corresponding to GO:0005741 mitochondrial outer membrane. The dual presence (cytoplasmic and outer-membrane–proximal) reflects a shuttle mechanism: cytoplasmic assembly and delivery to the mitochondrial interface.
- 04
Mechanistically, I hypothesize that the BTB/Kelch scaffold nucleates a transient assembly hub that binds precursor proteins and outer-membrane biogenesis factors.
The β-propeller confers substrate selectivity, while the broader BTB/Kelch family framework stabilizes multiprotein complexes. This hub likely cooperates with cytosolic chaperones and TOM complex receptors to funnel precursors to the insertion pathway. Likely partners include cytosolic Hsp90/Hsp70 systems that maintain precursor solubility, and TOM complex receptors that accept outer-membrane clients. By concentrating these interactions at the mitochondrial surface, the scaffold ensures efficient insertion and maturation of outer-membrane proteins central to mitochondrial function.
Technical details
InterPro entries
Sources
- Sequence: UniProt Q5VTJ3
- Structure: AlphaFold DB (PDB file)
- Domains: InterPro
- Dark protein list: Pharos (Tdark)
Method
BioReason-Pro with the ESM3 protein language model (esm3-sm-open-v1). How the atlas is made →